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Cluster: Rep_2875_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2875_c_0 Rep_2875_c_0_549 669985 671799 + GH154
pfam Rep_2875_c_0 Rep_2875_c_0_550 671952 672383 + EIIA-man
TC Rep_2875_c_0 Rep_2875_c_0_551 672435 672917 + 4.A.6.1.11
TC Rep_2875_c_0 Rep_2875_c_0_552 672988 673857 + 4.A.6.1.15
TC Rep_2875_c_0 Rep_2875_c_0_553 673850 674731 + 4.A.6.1.19
NULL(UNKNOWN) Rep_2875_c_0 Rep_2875_c_0_554 674806 675450 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2875_c_0 Rep_2875_c_0_555 675431 676582 + GH88
pfam Rep_2875_c_0 Rep_2875_c_0_556 676576 677418 + S6PP | Hydrolase_3
CAZyme Rep_2875_c_0 Rep_2875_c_0_557 677422 679053 + CBM91 | GH43_11
pfam Rep_2875_c_0 Rep_2875_c_0_558 679066 679881 + DUF7402
CAZyme Rep_2875_c_0 Rep_2875_c_0_559 679878 680822 + GH43_24
CAZyme Rep_2875_c_0 Rep_2875_c_0_560 680848 682077 + GH28
pfam Rep_2875_c_0 Rep_2875_c_0_561 682167 683075 + IU_nuc_hydro
CAZyme Rep_2875_c_0 Rep_2875_c_0_562 683119 684813 + GH154
TF Rep_2875_c_0 Rep_2875_c_0_563 684847 685539 - GntR
TC Rep_2875_c_0 Rep_2875_c_0_564 685775 687136 + 2.A.8.1.8
pfam Rep_2875_c_0 Rep_2875_c_0_565 687245 689023 + ILVD_EDD_N | ILV_EDD_C
pfam Rep_2875_c_0 Rep_2875_c_0_566 689211 689552 - ArsC
TC Rep_2875_c_0 Rep_2875_c_0_567 690073 691512 + 2.A.1.3.39
Gene ID: Rep_2875_c_0_549
Type: CAZyme
Location: 669985 - 671799 (+)
Gene ID: Rep_2875_c_0_550
Type: pfam
Location: 671952 - 672383 (+)
Gene ID: Rep_2875_c_0_551
Type: TC
Location: 672435 - 672917 (+)
Gene ID: Rep_2875_c_0_552
Type: TC
Location: 672988 - 673857 (+)
Gene ID: Rep_2875_c_0_553
Type: TC
Location: 673850 - 674731 (+)
Gene ID: Rep_2875_c_0_554
Type:
Location: 674806 - 675450 (+)
Gene ID: Rep_2875_c_0_555
Type: CAZyme
Location: 675431 - 676582 (+)
Gene ID: Rep_2875_c_0_556
Type: pfam
Location: 676576 - 677418 (+)
Gene ID: Rep_2875_c_0_557
Type: CAZyme
Location: 677422 - 679053 (+)
Gene ID: Rep_2875_c_0_558
Type: pfam
Location: 679066 - 679881 (+)
Gene ID: Rep_2875_c_0_559
Type: CAZyme
Location: 679878 - 680822 (+)
Gene ID: Rep_2875_c_0_560
Type: CAZyme
Location: 680848 - 682077 (+)
Gene ID: Rep_2875_c_0_561
Type: pfam
Location: 682167 - 683075 (+)
Gene ID: Rep_2875_c_0_562
Type: CAZyme
Location: 683119 - 684813 (+)
Gene ID: Rep_2875_c_0_563
Type: TF
Location: 684847 - 685539 (-)
Gene ID: Rep_2875_c_0_564
Type: TC
Location: 685775 - 687136 (+)
Gene ID: Rep_2875_c_0_565
Type: pfam
Location: 687245 - 689023 (+)
Gene ID: Rep_2875_c_0_566
Type: pfam
Location: 689211 - 689552 (-)
Gene ID: Rep_2875_c_0_567
Type: TC
Location: 690073 - 691512 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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