dbCAN Logo

Cluster: Rep_2875_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2875_c_0 Rep_2875_c_0_516 630060 631445 + GH2
CAZyme Rep_2875_c_0 Rep_2875_c_0_517 631442 632839 + GH2
NULL(UNKNOWN) Rep_2875_c_0 Rep_2875_c_0_518 632843 633298 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2875_c_0 Rep_2875_c_0_519 633452 634915 + 2.A.3.7.4
STP Rep_2875_c_0 Rep_2875_c_0_520 635117 635365 + PTS-HPr
STP Rep_2875_c_0 Rep_2875_c_0_521 635602 635844 + FeoA
TC Rep_2875_c_0 Rep_2875_c_0_522 635885 636106 + 9.A.8.1.6
TC Rep_2875_c_0 Rep_2875_c_0_523 636231 638558 + 9.A.8.1.6
Gene ID: Rep_2875_c_0_516
Type: CAZyme
Location: 630060 - 631445 (+)
Gene ID: Rep_2875_c_0_517
Type: CAZyme
Location: 631442 - 632839 (+)
Gene ID: Rep_2875_c_0_518
Type:
Location: 632843 - 633298 (+)
Gene ID: Rep_2875_c_0_519
Type: TC
Location: 633452 - 634915 (+)
Gene ID: Rep_2875_c_0_520
Type: STP
Location: 635117 - 635365 (+)
Gene ID: Rep_2875_c_0_521
Type: STP
Location: 635602 - 635844 (+)
Gene ID: Rep_2875_c_0_522
Type: TC
Location: 635885 - 636106 (+)
Gene ID: Rep_2875_c_0_523
Type: TC
Location: 636231 - 638558 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List