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Cluster: Rep_2871_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2871_c_23 Rep_2871_c_23_4 4062 5483 - GH1
TC Rep_2871_c_23 Rep_2871_c_23_5 5559 7343 - 4.A.3.1.1
TF Rep_2871_c_23 Rep_2871_c_23_6 7619 8629 + LacI
TC Rep_2871_c_23 Rep_2871_c_23_7 8964 10724 - 4.A.3.1.1
CAZyme Rep_2871_c_23 Rep_2871_c_23_8 10901 12343 - GH1
TF Rep_2871_c_23 Rep_2871_c_23_9 12685 13722 + LacI
CAZyme Rep_2871_c_23 Rep_2871_c_23_10 13984 15423 - GH1
TC Rep_2871_c_23 Rep_2871_c_23_11 15490 17265 - 4.A.3.1.1
TF Rep_2871_c_23 Rep_2871_c_23_12 17593 18627 + LacI
TC Rep_2871_c_23 Rep_2871_c_23_13 18842 19180 + 4.A.3.1.2
Gene ID: Rep_2871_c_23_4
Type: CAZyme
Location: 4062 - 5483 (-)
Gene ID: Rep_2871_c_23_5
Type: TC
Location: 5559 - 7343 (-)
Gene ID: Rep_2871_c_23_6
Type: TF
Location: 7619 - 8629 (+)
Gene ID: Rep_2871_c_23_7
Type: TC
Location: 8964 - 10724 (-)
Gene ID: Rep_2871_c_23_8
Type: CAZyme
Location: 10901 - 12343 (-)
Gene ID: Rep_2871_c_23_9
Type: TF
Location: 12685 - 13722 (+)
Gene ID: Rep_2871_c_23_10
Type: CAZyme
Location: 13984 - 15423 (-)
Gene ID: Rep_2871_c_23_11
Type: TC
Location: 15490 - 17265 (-)
Gene ID: Rep_2871_c_23_12
Type: TF
Location: 17593 - 18627 (+)
Gene ID: Rep_2871_c_23_13
Type: TC
Location: 18842 - 19180 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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