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Cluster: Rep_2871_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2871_c_22 Rep_2871_c_22_8 5475 6644 - CE9
STP Rep_2871_c_22 Rep_2871_c_22_9 6764 7930 - SIS | SIS
TF Rep_2871_c_22 Rep_2871_c_22_10 8045 8776 - GntR
TC Rep_2871_c_22 Rep_2871_c_22_11 8961 10043 - 4.A.6.1.4
TC Rep_2871_c_22 Rep_2871_c_22_12 10033 10833 - 4.A.6.1.4
TC Rep_2871_c_22 Rep_2871_c_22_13 10924 11406 - 4.A.6.1.4
pfam Rep_2871_c_22 Rep_2871_c_22_14 11443 11724 - YajC
TC Rep_2871_c_22 Rep_2871_c_22_15 11724 12167 - 4.A.6.1.16
Gene ID: Rep_2871_c_22_8
Type: CAZyme
Location: 5475 - 6644 (-)
Gene ID: Rep_2871_c_22_9
Type: STP
Location: 6764 - 7930 (-)
Gene ID: Rep_2871_c_22_10
Type: TF
Location: 8045 - 8776 (-)
Gene ID: Rep_2871_c_22_11
Type: TC
Location: 8961 - 10043 (-)
Gene ID: Rep_2871_c_22_12
Type: TC
Location: 10033 - 10833 (-)
Gene ID: Rep_2871_c_22_13
Type: TC
Location: 10924 - 11406 (-)
Gene ID: Rep_2871_c_22_14
Type: pfam
Location: 11443 - 11724 (-)
Gene ID: Rep_2871_c_22_15
Type: TC
Location: 11724 - 12167 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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