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Cluster: Rep_2864_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2864_c_27 Rep_2864_c_27_11 15087 17537 - 4.A.1.1.8
NULL(UNKNOWN) Rep_2864_c_27 Rep_2864_c_27_12 17559 17678 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2864_c_27 Rep_2864_c_27_13 17762 18481 + GntR
TC Rep_2864_c_27 Rep_2864_c_27_14 18788 20104 + 3.A.1.1.45
TC Rep_2864_c_27 Rep_2864_c_27_15 20192 21046 + 3.A.1.1.45
TC Rep_2864_c_27 Rep_2864_c_27_16 21046 21885 + 3.A.1.1.45
TC Rep_2864_c_27 Rep_2864_c_27_17 21954 23153 + 3.A.1.1.22
CAZyme Rep_2864_c_27 Rep_2864_c_27_18 23528 25795 - GT35
CAZyme Rep_2864_c_27 Rep_2864_c_27_19 25924 27429 - GH77
Gene ID: Rep_2864_c_27_11
Type: TC
Location: 15087 - 17537 (-)
Gene ID: Rep_2864_c_27_12
Type:
Location: 17559 - 17678 (+)
Gene ID: Rep_2864_c_27_13
Type: TF
Location: 17762 - 18481 (+)
Gene ID: Rep_2864_c_27_14
Type: TC
Location: 18788 - 20104 (+)
Gene ID: Rep_2864_c_27_15
Type: TC
Location: 20192 - 21046 (+)
Gene ID: Rep_2864_c_27_16
Type: TC
Location: 21046 - 21885 (+)
Gene ID: Rep_2864_c_27_17
Type: TC
Location: 21954 - 23153 (+)
Gene ID: Rep_2864_c_27_18
Type: CAZyme
Location: 23528 - 25795 (-)
Gene ID: Rep_2864_c_27_19
Type: CAZyme
Location: 25924 - 27429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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