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Cluster: Rep_2864_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2864_c_15 Rep_2864_c_15_39 44547 45341 - 3.A.1.34.1
TC Rep_2864_c_15 Rep_2864_c_15_40 45334 46257 - 3.A.1.34.1
TC Rep_2864_c_15 Rep_2864_c_15_41 46461 47441 - 3.A.1.34.1
NULL(UNKNOWN) Rep_2864_c_15 Rep_2864_c_15_42 47602 48387 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2864_c_15 Rep_2864_c_15_43 48647 50050 - tRNA-synt_2 | tRNA_anti-codon
TC Rep_2864_c_15 Rep_2864_c_15_44 50232 50795 - 4.A.1.2.6
peptidase Rep_2864_c_15 Rep_2864_c_15_45 51039 51938 + S09.UPW
TC Rep_2864_c_15 Rep_2864_c_15_46 52412 54772 + 9.A.8.1.6
TC Rep_2864_c_15 Rep_2864_c_15_47 54893 56089 + 2.A.1.2.18
CAZyme Rep_2864_c_15 Rep_2864_c_15_48 56243 57619 + GH13_20
Gene ID: Rep_2864_c_15_39
Type: TC
Location: 44547 - 45341 (-)
Gene ID: Rep_2864_c_15_40
Type: TC
Location: 45334 - 46257 (-)
Gene ID: Rep_2864_c_15_41
Type: TC
Location: 46461 - 47441 (-)
Gene ID: Rep_2864_c_15_42
Type:
Location: 47602 - 48387 (-)
Gene ID: Rep_2864_c_15_43
Type: pfam
Location: 48647 - 50050 (-)
Gene ID: Rep_2864_c_15_44
Type: TC
Location: 50232 - 50795 (-)
Gene ID: Rep_2864_c_15_45
Type: peptidase
Location: 51039 - 51938 (+)
Gene ID: Rep_2864_c_15_46
Type: TC
Location: 52412 - 54772 (+)
Gene ID: Rep_2864_c_15_47
Type: TC
Location: 54893 - 56089 (+)
Gene ID: Rep_2864_c_15_48
Type: CAZyme
Location: 56243 - 57619 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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