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Cluster: Rep_2862_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2862_c_10 Rep_2862_c_10_1 199 1932 - GH13_30
STP Rep_2862_c_10 Rep_2862_c_10_2 2453 3199 - STAS
STP Rep_2862_c_10 Rep_2862_c_10_3 3281 5626 - GAF | SpoIIE
TC Rep_2862_c_10 Rep_2862_c_10_4 6366 7394 - 3.A.1.5.36
TC Rep_2862_c_10 Rep_2862_c_10_5 7395 8486 - 3.A.1.5.34
TC Rep_2862_c_10 Rep_2862_c_10_6 8489 9424 - 3.A.1.5.11
TC Rep_2862_c_10 Rep_2862_c_10_7 9439 10476 - 3.A.1.5.37
TC Rep_2862_c_10 Rep_2862_c_10_8 10633 12309 - 3.A.1.5.35
Gene ID: Rep_2862_c_10_1
Type: CAZyme
Location: 199 - 1932 (-)
Gene ID: Rep_2862_c_10_2
Type: STP
Location: 2453 - 3199 (-)
Gene ID: Rep_2862_c_10_3
Type: STP
Location: 3281 - 5626 (-)
Gene ID: Rep_2862_c_10_4
Type: TC
Location: 6366 - 7394 (-)
Gene ID: Rep_2862_c_10_5
Type: TC
Location: 7395 - 8486 (-)
Gene ID: Rep_2862_c_10_6
Type: TC
Location: 8489 - 9424 (-)
Gene ID: Rep_2862_c_10_7
Type: TC
Location: 9439 - 10476 (-)
Gene ID: Rep_2862_c_10_8
Type: TC
Location: 10633 - 12309 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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