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Cluster: Rep_2862_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2862_c_36 Rep_2862_c_36_5 7882 10332 - 4.A.1.1.8
NULL(UNKNOWN) Rep_2862_c_36 Rep_2862_c_36_6 10354 10473 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2862_c_36 Rep_2862_c_36_7 10557 11276 + GntR
TC Rep_2862_c_36 Rep_2862_c_36_8 11583 12899 + 3.A.1.1.45
TC Rep_2862_c_36 Rep_2862_c_36_9 12987 13841 + 3.A.1.1.45
TC Rep_2862_c_36 Rep_2862_c_36_10 13841 14680 + 3.A.1.1.45
TC Rep_2862_c_36 Rep_2862_c_36_11 14748 15947 + 3.A.1.1.22
CAZyme Rep_2862_c_36 Rep_2862_c_36_12 16405 18672 - GT35
Gene ID: Rep_2862_c_36_5
Type: TC
Location: 7882 - 10332 (-)
Gene ID: Rep_2862_c_36_6
Type:
Location: 10354 - 10473 (+)
Gene ID: Rep_2862_c_36_7
Type: TF
Location: 10557 - 11276 (+)
Gene ID: Rep_2862_c_36_8
Type: TC
Location: 11583 - 12899 (+)
Gene ID: Rep_2862_c_36_9
Type: TC
Location: 12987 - 13841 (+)
Gene ID: Rep_2862_c_36_10
Type: TC
Location: 13841 - 14680 (+)
Gene ID: Rep_2862_c_36_11
Type: TC
Location: 14748 - 15947 (+)
Gene ID: Rep_2862_c_36_12
Type: CAZyme
Location: 16405 - 18672 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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