Cluster: Rep_2862_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2862
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2862_c_29 | Rep_2862_c_29_2 | 517 | 2736 | + | 9.B.97.5.1 |
| NULL(UNKNOWN) | Rep_2862_c_29 | Rep_2862_c_29_3 | 2967 | 3134 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2862_c_29 | Rep_2862_c_29_4 | 3122 | 4384 | - | 2.A.55.3.6 |
| STP | Rep_2862_c_29 | Rep_2862_c_29_5 | 4393 | 6237 | - | CBS | CBS |
| CAZyme | Rep_2862_c_29 | Rep_2862_c_29_6 | 6655 | 8061 | - | CE4 |
Gene ID: Rep_2862_c_29_2
Type: TC
Location: 517 - 2736 (+)
Type: TC
Location: 517 - 2736 (+)
Gene ID: Rep_2862_c_29_3
Type:
Location: 2967 - 3134 (+)
Type:
Location: 2967 - 3134 (+)
Gene ID: Rep_2862_c_29_4
Type: TC
Location: 3122 - 4384 (-)
Type: TC
Location: 3122 - 4384 (-)
Gene ID: Rep_2862_c_29_5
Type: STP
Location: 4393 - 6237 (-)
Type: STP
Location: 4393 - 6237 (-)
Gene ID: Rep_2862_c_29_6
Type: CAZyme
Location: 6655 - 8061 (-)
Type: CAZyme
Location: 6655 - 8061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902489775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.