dbCAN Logo

Cluster: Rep_2862_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2862_c_19 Rep_2862_c_19_13 14254 14592 - 4.A.3.1.2
TF Rep_2862_c_19 Rep_2862_c_19_14 14807 15811 - LacI
TC Rep_2862_c_19 Rep_2862_c_19_15 16169 17935 + 4.A.3.1.1
CAZyme Rep_2862_c_19 Rep_2862_c_19_16 18002 19441 + GH1
TF Rep_2862_c_19 Rep_2862_c_19_17 19710 20747 - LacI
CAZyme Rep_2862_c_19 Rep_2862_c_19_18 21089 22531 + GH1
TC Rep_2862_c_19 Rep_2862_c_19_19 22709 24469 + 4.A.3.1.1
TF Rep_2862_c_19 Rep_2862_c_19_20 24802 25812 - LacI
TC Rep_2862_c_19 Rep_2862_c_19_21 26088 27866 + 4.A.3.1.1
CAZyme Rep_2862_c_19 Rep_2862_c_19_22 27942 29363 + GH1
Gene ID: Rep_2862_c_19_13
Type: TC
Location: 14254 - 14592 (-)
Gene ID: Rep_2862_c_19_14
Type: TF
Location: 14807 - 15811 (-)
Gene ID: Rep_2862_c_19_15
Type: TC
Location: 16169 - 17935 (+)
Gene ID: Rep_2862_c_19_16
Type: CAZyme
Location: 18002 - 19441 (+)
Gene ID: Rep_2862_c_19_17
Type: TF
Location: 19710 - 20747 (-)
Gene ID: Rep_2862_c_19_18
Type: CAZyme
Location: 21089 - 22531 (+)
Gene ID: Rep_2862_c_19_19
Type: TC
Location: 22709 - 24469 (+)
Gene ID: Rep_2862_c_19_20
Type: TF
Location: 24802 - 25812 (-)
Gene ID: Rep_2862_c_19_21
Type: TC
Location: 26088 - 27866 (+)
Gene ID: Rep_2862_c_19_22
Type: CAZyme
Location: 27942 - 29363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List