dbCAN Logo

Cluster: Rep_2858_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2858_c_25 Rep_2858_c_25_5 5936 7441 + GH77
CAZyme Rep_2858_c_25 Rep_2858_c_25_6 7571 9838 + GT35
TC Rep_2858_c_25 Rep_2858_c_25_7 10373 11572 - 3.A.1.1.22
TC Rep_2858_c_25 Rep_2858_c_25_8 11641 12480 - 3.A.1.1.45
TC Rep_2858_c_25 Rep_2858_c_25_9 12480 13334 - 3.A.1.1.45
TC Rep_2858_c_25 Rep_2858_c_25_10 13422 14738 - 3.A.1.1.45
TF Rep_2858_c_25 Rep_2858_c_25_11 15045 15764 - GntR
TC Rep_2858_c_25 Rep_2858_c_25_12 15992 18445 + 4.A.1.1.8
Gene ID: Rep_2858_c_25_5
Type: CAZyme
Location: 5936 - 7441 (+)
Gene ID: Rep_2858_c_25_6
Type: CAZyme
Location: 7571 - 9838 (+)
Gene ID: Rep_2858_c_25_7
Type: TC
Location: 10373 - 11572 (-)
Gene ID: Rep_2858_c_25_8
Type: TC
Location: 11641 - 12480 (-)
Gene ID: Rep_2858_c_25_9
Type: TC
Location: 12480 - 13334 (-)
Gene ID: Rep_2858_c_25_10
Type: TC
Location: 13422 - 14738 (-)
Gene ID: Rep_2858_c_25_11
Type: TF
Location: 15045 - 15764 (-)
Gene ID: Rep_2858_c_25_12
Type: TC
Location: 15992 - 18445 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List