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Cluster: Rep_2846_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2846_c_22 Rep_2846_c_22_100 145467 146456 + 4.A.6.1.15
TC Rep_2846_c_22 Rep_2846_c_22_101 146475 147293 + 4.A.6.1.15
TC Rep_2846_c_22 Rep_2846_c_22_102 147310 148230 + 4.A.6.1.15
pfam Rep_2846_c_22 Rep_2846_c_22_103 148351 148749 + DUF956
CAZyme Rep_2846_c_22 Rep_2846_c_22_104 150127 155406 + CBM32 | GH2
CAZyme Rep_2846_c_22 Rep_2846_c_22_105 155503 160290 + CBM32 | CBM32 | CBM32 | GH20
CAZyme Rep_2846_c_22 Rep_2846_c_22_106 160334 166456 + GH84
NULL(UNKNOWN) Rep_2846_c_22 Rep_2846_c_22_107 166716 166970 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2846_c_22 Rep_2846_c_22_108 166976 167842 + rve | rve_2 | rve_3
TC Rep_2846_c_22 Rep_2846_c_22_109 168146 170095 - 9.B.106.2.2
TC Rep_2846_c_22 Rep_2846_c_22_110 170228 173095 - 2.A.103.1.7
Gene ID: Rep_2846_c_22_100
Type: TC
Location: 145467 - 146456 (+)
Gene ID: Rep_2846_c_22_101
Type: TC
Location: 146475 - 147293 (+)
Gene ID: Rep_2846_c_22_102
Type: TC
Location: 147310 - 148230 (+)
Gene ID: Rep_2846_c_22_103
Type: pfam
Location: 148351 - 148749 (+)
Gene ID: Rep_2846_c_22_104
Type: CAZyme
Location: 150127 - 155406 (+)
Gene ID: Rep_2846_c_22_105
Type: CAZyme
Location: 155503 - 160290 (+)
Gene ID: Rep_2846_c_22_106
Type: CAZyme
Location: 160334 - 166456 (+)
Gene ID: Rep_2846_c_22_107
Type:
Location: 166716 - 166970 (+)
Gene ID: Rep_2846_c_22_108
Type: pfam
Location: 166976 - 167842 (+)
Gene ID: Rep_2846_c_22_109
Type: TC
Location: 168146 - 170095 (-)
Gene ID: Rep_2846_c_22_110
Type: TC
Location: 170228 - 173095 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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