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Cluster: Rep_2846_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2846_c_22 Rep_2846_c_22_51 72866 74236 + 4.A.1.2.6
peptidase Rep_2846_c_22 Rep_2846_c_22_52 74342 75322 + S09.UPC
pfam Rep_2846_c_22 Rep_2846_c_22_53 75446 76090 + DUF4867
CAZyme Rep_2846_c_22 Rep_2846_c_22_54 76435 77865 + GH1
pfam Rep_2846_c_22 Rep_2846_c_22_55 78168 79679 - Sde182_NH-like
peptidase Rep_2846_c_22 Rep_2846_c_22_56 79942 81279 - S09.UPW
TC Rep_2846_c_22 Rep_2846_c_22_57 81770 83197 + 4.A.1.2.11
CAZyme Rep_2846_c_22 Rep_2846_c_22_58 83408 84721 + GH140
TC Rep_2846_c_22 Rep_2846_c_22_59 84911 87679 - 3.A.3.4.1
Gene ID: Rep_2846_c_22_51
Type: TC
Location: 72866 - 74236 (+)
Gene ID: Rep_2846_c_22_52
Type: peptidase
Location: 74342 - 75322 (+)
Gene ID: Rep_2846_c_22_53
Type: pfam
Location: 75446 - 76090 (+)
Gene ID: Rep_2846_c_22_54
Type: CAZyme
Location: 76435 - 77865 (+)
Gene ID: Rep_2846_c_22_55
Type: pfam
Location: 78168 - 79679 (-)
Gene ID: Rep_2846_c_22_56
Type: peptidase
Location: 79942 - 81279 (-)
Gene ID: Rep_2846_c_22_57
Type: TC
Location: 81770 - 83197 (+)
Gene ID: Rep_2846_c_22_58
Type: CAZyme
Location: 83408 - 84721 (+)
Gene ID: Rep_2846_c_22_59
Type: TC
Location: 84911 - 87679 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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