dbCAN Logo

Cluster: Rep_283_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_283_c_307 Rep_283_c_307_6 3601 4539 + GT2
TC Rep_283_c_307 Rep_283_c_307_7 4694 5647 + 3.A.1.128.7
pfam Rep_283_c_307 Rep_283_c_307_8 5644 6960 + ABC2_membrane_3
pfam Rep_283_c_307 Rep_283_c_307_9 7074 8390 - GldN
TC Rep_283_c_307 Rep_283_c_307_10 8470 10047 - 9.A.25.1.1
pfam Rep_283_c_307 Rep_283_c_307_11 10051 11034 - GldL_N
TC Rep_283_c_307 Rep_283_c_307_12 11059 12540 - 9.A.25.1.1
pfam Rep_283_c_307 Rep_283_c_307_13 12571 13581 - PorP_SprF
TC Rep_283_c_307 Rep_283_c_307_14 13665 14399 - 1.B.44.1.1
Gene ID: Rep_283_c_307_6
Type: CAZyme
Location: 3601 - 4539 (+)
Gene ID: Rep_283_c_307_7
Type: TC
Location: 4694 - 5647 (+)
Gene ID: Rep_283_c_307_8
Type: pfam
Location: 5644 - 6960 (+)
Gene ID: Rep_283_c_307_9
Type: pfam
Location: 7074 - 8390 (-)
Gene ID: Rep_283_c_307_10
Type: TC
Location: 8470 - 10047 (-)
Gene ID: Rep_283_c_307_11
Type: pfam
Location: 10051 - 11034 (-)
Gene ID: Rep_283_c_307_12
Type: TC
Location: 11059 - 12540 (-)
Gene ID: Rep_283_c_307_13
Type: pfam
Location: 12571 - 13581 (-)
Gene ID: Rep_283_c_307_14
Type: TC
Location: 13665 - 14399 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List