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Cluster: Rep_2829_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2829_c_2 Rep_2829_c_2_25 35644 36393 + 9.B.18.1.2
CAZyme Rep_2829_c_2 Rep_2829_c_2_26 36380 37186 + GT26
pfam Rep_2829_c_2 Rep_2829_c_2_27 37179 38294 + Epimerase_2
pfam Rep_2829_c_2 Rep_2829_c_2_28 38287 39393 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme Rep_2829_c_2 Rep_2829_c_2_29 39390 40469 + GT4
CAZyme Rep_2829_c_2 Rep_2829_c_2_30 40450 41208 + GT32
CAZyme Rep_2829_c_2 Rep_2829_c_2_31 41205 42125 + GT2
NULL(UNKNOWN) Rep_2829_c_2 Rep_2829_c_2_32 42122 43402 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2829_c_2 Rep_2829_c_2_33 43404 44354 + GT2
NULL(UNKNOWN) Rep_2829_c_2 Rep_2829_c_2_34 44362 45264 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2829_c_2 Rep_2829_c_2_35 45765 47195 + 2.A.66.2.23
Gene ID: Rep_2829_c_2_25
Type: TC
Location: 35644 - 36393 (+)
Gene ID: Rep_2829_c_2_26
Type: CAZyme
Location: 36380 - 37186 (+)
Gene ID: Rep_2829_c_2_27
Type: pfam
Location: 37179 - 38294 (+)
Gene ID: Rep_2829_c_2_28
Type: pfam
Location: 38287 - 39393 (+)
Gene ID: Rep_2829_c_2_29
Type: CAZyme
Location: 39390 - 40469 (+)
Gene ID: Rep_2829_c_2_30
Type: CAZyme
Location: 40450 - 41208 (+)
Gene ID: Rep_2829_c_2_31
Type: CAZyme
Location: 41205 - 42125 (+)
Gene ID: Rep_2829_c_2_32
Type:
Location: 42122 - 43402 (+)
Gene ID: Rep_2829_c_2_33
Type: CAZyme
Location: 43404 - 44354 (+)
Gene ID: Rep_2829_c_2_34
Type:
Location: 44362 - 45264 (+)
Gene ID: Rep_2829_c_2_35
Type: TC
Location: 45765 - 47195 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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