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Cluster: Rep_2829_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2829_c_0 Rep_2829_c_0_244 281879 282544 + 9.B.18.1.2
CAZyme Rep_2829_c_0 Rep_2829_c_0_245 282671 283378 + GT2
CAZyme Rep_2829_c_0 Rep_2829_c_0_246 283383 284375 + GT2
pfam Rep_2829_c_0 Rep_2829_c_0_247 284570 285685 + EpsG
CAZyme Rep_2829_c_0 Rep_2829_c_0_248 285678 286673 + GT2
CAZyme Rep_2829_c_0 Rep_2829_c_0_249 287074 288234 + GT2
Gene ID: Rep_2829_c_0_244
Type: TC
Location: 281879 - 282544 (+)
Gene ID: Rep_2829_c_0_245
Type: CAZyme
Location: 282671 - 283378 (+)
Gene ID: Rep_2829_c_0_246
Type: CAZyme
Location: 283383 - 284375 (+)
Gene ID: Rep_2829_c_0_247
Type: pfam
Location: 284570 - 285685 (+)
Gene ID: Rep_2829_c_0_248
Type: CAZyme
Location: 285678 - 286673 (+)
Gene ID: Rep_2829_c_0_249
Type: CAZyme
Location: 287074 - 288234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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