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Cluster: Rep_2829_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2829_c_0 Rep_2829_c_0_29 37127 38803 + 3.A.1.5.35
TC Rep_2829_c_0 Rep_2829_c_0_30 38960 39997 + 3.A.1.5.37
TC Rep_2829_c_0 Rep_2829_c_0_31 40012 40947 + 3.A.1.5.11
TC Rep_2829_c_0 Rep_2829_c_0_32 40950 42041 + 3.A.1.5.34
TC Rep_2829_c_0 Rep_2829_c_0_33 42042 43070 + 3.A.1.5.36
STP Rep_2829_c_0 Rep_2829_c_0_34 43818 46163 + GAF | SpoIIE
STP Rep_2829_c_0 Rep_2829_c_0_35 46242 46988 + STAS
CAZyme Rep_2829_c_0 Rep_2829_c_0_36 47732 49465 + GH13_30
Gene ID: Rep_2829_c_0_29
Type: TC
Location: 37127 - 38803 (+)
Gene ID: Rep_2829_c_0_30
Type: TC
Location: 38960 - 39997 (+)
Gene ID: Rep_2829_c_0_31
Type: TC
Location: 40012 - 40947 (+)
Gene ID: Rep_2829_c_0_32
Type: TC
Location: 40950 - 42041 (+)
Gene ID: Rep_2829_c_0_33
Type: TC
Location: 42042 - 43070 (+)
Gene ID: Rep_2829_c_0_34
Type: STP
Location: 43818 - 46163 (+)
Gene ID: Rep_2829_c_0_35
Type: STP
Location: 46242 - 46988 (+)
Gene ID: Rep_2829_c_0_36
Type: CAZyme
Location: 47732 - 49465 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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