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Cluster: Rep_2829_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2829_c_20 Rep_2829_c_20_11 15263 17713 - 4.A.1.1.8
NULL(UNKNOWN) Rep_2829_c_20 Rep_2829_c_20_12 17735 17854 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2829_c_20 Rep_2829_c_20_13 17938 18657 + GntR
TC Rep_2829_c_20 Rep_2829_c_20_14 18964 20280 + 3.A.1.1.45
TC Rep_2829_c_20 Rep_2829_c_20_15 20368 21222 + 3.A.1.1.45
TC Rep_2829_c_20 Rep_2829_c_20_16 21222 22061 + 3.A.1.1.45
TC Rep_2829_c_20 Rep_2829_c_20_17 22130 23329 + 3.A.1.1.22
CAZyme Rep_2829_c_20 Rep_2829_c_20_18 23783 26050 - GT35
CAZyme Rep_2829_c_20 Rep_2829_c_20_19 26180 27685 - GH77
Gene ID: Rep_2829_c_20_11
Type: TC
Location: 15263 - 17713 (-)
Gene ID: Rep_2829_c_20_12
Type:
Location: 17735 - 17854 (+)
Gene ID: Rep_2829_c_20_13
Type: TF
Location: 17938 - 18657 (+)
Gene ID: Rep_2829_c_20_14
Type: TC
Location: 18964 - 20280 (+)
Gene ID: Rep_2829_c_20_15
Type: TC
Location: 20368 - 21222 (+)
Gene ID: Rep_2829_c_20_16
Type: TC
Location: 21222 - 22061 (+)
Gene ID: Rep_2829_c_20_17
Type: TC
Location: 22130 - 23329 (+)
Gene ID: Rep_2829_c_20_18
Type: CAZyme
Location: 23783 - 26050 (-)
Gene ID: Rep_2829_c_20_19
Type: CAZyme
Location: 26180 - 27685 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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