dbCAN HGM

Cluster: Rep_2828_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2828_c_10	Rep_2828_c_10_29	43627	44871	-	GT4
pfam	Rep_2828_c_10	Rep_2828_c_10_30	44885	45649	-	BcrAD_BadFG
pfam	Rep_2828_c_10	Rep_2828_c_10_31	45701	46864	-	HGD-D
TC	Rep_2828_c_10	Rep_2828_c_10_32	46942	47727	-	3.A.1.5.36
TC	Rep_2828_c_10	Rep_2828_c_10_33	47714	48712	-	3.A.1.5.35
TC	Rep_2828_c_10	Rep_2828_c_10_34	48716	49543	-	3.A.1.5.39
TC	Rep_2828_c_10	Rep_2828_c_10_35	49543	50496	-	3.A.1.5.11
TC	Rep_2828_c_10	Rep_2828_c_10_36	50583	52193	-	3.A.1.5.11
pfam	Rep_2828_c_10	Rep_2828_c_10_37	52378	53661	-	HGD-D
TC	Rep_2828_c_10	Rep_2828_c_10_38	54112	55182	-	3.A.1.1.3
TC	Rep_2828_c_10	Rep_2828_c_10_39	55186	56667	-	3.A.1.8.1

Gene ID: Rep_2828_c_10_29
Type: CAZyme
Location: 43627 - 44871 (-)

Gene ID: Rep_2828_c_10_30
Type: pfam
Location: 44885 - 45649 (-)

Gene ID: Rep_2828_c_10_31
Type: pfam
Location: 45701 - 46864 (-)

Gene ID: Rep_2828_c_10_32
Type: TC
Location: 46942 - 47727 (-)

Gene ID: Rep_2828_c_10_33
Type: TC
Location: 47714 - 48712 (-)

Gene ID: Rep_2828_c_10_34
Type: TC
Location: 48716 - 49543 (-)

Gene ID: Rep_2828_c_10_35
Type: TC
Location: 49543 - 50496 (-)

Gene ID: Rep_2828_c_10_36
Type: TC
Location: 50583 - 52193 (-)

Gene ID: Rep_2828_c_10_37
Type: pfam
Location: 52378 - 53661 (-)

Gene ID: Rep_2828_c_10_38
Type: TC
Location: 54112 - 55182 (-)

Gene ID: Rep_2828_c_10_39
Type: TC
Location: 55186 - 56667 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2828_c_10_32	vegan > omnivore	2.46101	0.00701
Rep_2828_c_10_33	vegan > omnivore	1.19815	0.00701
Rep_2828_c_10_34	vegan > omnivore	2.67528	0.00701
Rep_2828_c_10_35	vegan > omnivore	2.49104	0.00701
Rep_2828_c_10_36	vegan > omnivore	2.83433	0.00701