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Cluster: Rep_2828_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2828_c_1 Rep_2828_c_1_81 90177 91535 - 2.A.33.1.1
pfam Rep_2828_c_1 Rep_2828_c_1_82 91803 92726 - DHH | DHHA2
STP Rep_2828_c_1 Rep_2828_c_1_83 92893 93846 - Glucokinase
TC Rep_2828_c_1 Rep_2828_c_1_84 94088 94420 - 4.A.3.2.3
TC Rep_2828_c_1 Rep_2828_c_1_85 94430 94732 - 4.A.3.2.9
TC Rep_2828_c_1 Rep_2828_c_1_86 94893 96236 - 4.A.3.2.2
CAZyme Rep_2828_c_1 Rep_2828_c_1_87 96357 97757 - GH1
Gene ID: Rep_2828_c_1_81
Type: TC
Location: 90177 - 91535 (-)
Gene ID: Rep_2828_c_1_82
Type: pfam
Location: 91803 - 92726 (-)
Gene ID: Rep_2828_c_1_83
Type: STP
Location: 92893 - 93846 (-)
Gene ID: Rep_2828_c_1_84
Type: TC
Location: 94088 - 94420 (-)
Gene ID: Rep_2828_c_1_85
Type: TC
Location: 94430 - 94732 (-)
Gene ID: Rep_2828_c_1_86
Type: TC
Location: 94893 - 96236 (-)
Gene ID: Rep_2828_c_1_87
Type: CAZyme
Location: 96357 - 97757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2828_c_1_85 vegan > omnivore 1.00032 0.00701

🧭 Explore Read Mapping of CGC

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