dbCAN HGM

Cluster: Rep_2827_CGC7

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2827_c_4	Rep_2827_c_4_58	60962	62443	+	3.A.1.8.1
TC	Rep_2827_c_4	Rep_2827_c_4_59	62447	63517	+	3.A.1.1.3
pfam	Rep_2827_c_4	Rep_2827_c_4_60	63949	65232	+	HGD-D
TC	Rep_2827_c_4	Rep_2827_c_4_61	65417	67027	+	3.A.1.5.11
TC	Rep_2827_c_4	Rep_2827_c_4_62	67115	68068	+	3.A.1.5.11
TC	Rep_2827_c_4	Rep_2827_c_4_63	68068	68895	+	3.A.1.5.39
TC	Rep_2827_c_4	Rep_2827_c_4_64	68899	69897	+	3.A.1.5.35
TC	Rep_2827_c_4	Rep_2827_c_4_65	69884	70669	+	3.A.1.5.36
pfam	Rep_2827_c_4	Rep_2827_c_4_66	70747	71910	+	HGD-D
pfam	Rep_2827_c_4	Rep_2827_c_4_67	71962	72726	+	BcrAD_BadFG
CAZyme	Rep_2827_c_4	Rep_2827_c_4_68	72740	73984	+	GT4

Gene ID: Rep_2827_c_4_58
Type: TC
Location: 60962 - 62443 (+)

Gene ID: Rep_2827_c_4_59
Type: TC
Location: 62447 - 63517 (+)

Gene ID: Rep_2827_c_4_60
Type: pfam
Location: 63949 - 65232 (+)

Gene ID: Rep_2827_c_4_61
Type: TC
Location: 65417 - 67027 (+)

Gene ID: Rep_2827_c_4_62
Type: TC
Location: 67115 - 68068 (+)

Gene ID: Rep_2827_c_4_63
Type: TC
Location: 68068 - 68895 (+)

Gene ID: Rep_2827_c_4_64
Type: TC
Location: 68899 - 69897 (+)

Gene ID: Rep_2827_c_4_65
Type: TC
Location: 69884 - 70669 (+)

Gene ID: Rep_2827_c_4_66
Type: pfam
Location: 70747 - 71910 (+)

Gene ID: Rep_2827_c_4_67
Type: pfam
Location: 71962 - 72726 (+)

Gene ID: Rep_2827_c_4_68
Type: CAZyme
Location: 72740 - 73984 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2827_c_4_61	vegan > omnivore	3.39796	0.01057
Rep_2827_c_4_62	vegan > omnivore	2.94160	0.01057
Rep_2827_c_4_63	vegan > omnivore	3.32705	0.01057
Rep_2827_c_4_64	vegan > omnivore	1.36736	0.01057
Rep_2827_c_4_65	vegan > omnivore	2.66707	0.01057