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Cluster: Rep_2827_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2827_c_15 Rep_2827_c_15_21 25407 27083 + 3.A.1.5.35
TC Rep_2827_c_15 Rep_2827_c_15_22 27241 28278 + 3.A.1.5.37
TC Rep_2827_c_15 Rep_2827_c_15_23 28293 29228 + 3.A.1.5.11
TC Rep_2827_c_15 Rep_2827_c_15_24 29231 30322 + 3.A.1.5.34
TC Rep_2827_c_15 Rep_2827_c_15_25 30322 31350 + 3.A.1.5.36
STP Rep_2827_c_15 Rep_2827_c_15_26 32094 34439 + GAF | SpoIIE
STP Rep_2827_c_15 Rep_2827_c_15_27 34518 35264 + STAS
CAZyme Rep_2827_c_15 Rep_2827_c_15_28 36194 37927 + GH13_30
Gene ID: Rep_2827_c_15_21
Type: TC
Location: 25407 - 27083 (+)
Gene ID: Rep_2827_c_15_22
Type: TC
Location: 27241 - 28278 (+)
Gene ID: Rep_2827_c_15_23
Type: TC
Location: 28293 - 29228 (+)
Gene ID: Rep_2827_c_15_24
Type: TC
Location: 29231 - 30322 (+)
Gene ID: Rep_2827_c_15_25
Type: TC
Location: 30322 - 31350 (+)
Gene ID: Rep_2827_c_15_26
Type: STP
Location: 32094 - 34439 (+)
Gene ID: Rep_2827_c_15_27
Type: STP
Location: 34518 - 35264 (+)
Gene ID: Rep_2827_c_15_28
Type: CAZyme
Location: 36194 - 37927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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