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Cluster: Rep_2811_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2811_c_37 Rep_2811_c_37_2 1364 1702 - 4.A.3.1.2
TF Rep_2811_c_37 Rep_2811_c_37_3 1917 2921 - LacI
TC Rep_2811_c_37 Rep_2811_c_37_4 3278 5053 + 4.A.3.1.1
CAZyme Rep_2811_c_37 Rep_2811_c_37_5 5120 6559 + GH1
TF Rep_2811_c_37 Rep_2811_c_37_6 6906 7916 - LacI
TC Rep_2811_c_37 Rep_2811_c_37_7 8192 9970 + 4.A.3.1.1
CAZyme Rep_2811_c_37 Rep_2811_c_37_8 10046 11467 + GH1
Gene ID: Rep_2811_c_37_2
Type: TC
Location: 1364 - 1702 (-)
Gene ID: Rep_2811_c_37_3
Type: TF
Location: 1917 - 2921 (-)
Gene ID: Rep_2811_c_37_4
Type: TC
Location: 3278 - 5053 (+)
Gene ID: Rep_2811_c_37_5
Type: CAZyme
Location: 5120 - 6559 (+)
Gene ID: Rep_2811_c_37_6
Type: TF
Location: 6906 - 7916 (-)
Gene ID: Rep_2811_c_37_7
Type: TC
Location: 8192 - 9970 (+)
Gene ID: Rep_2811_c_37_8
Type: CAZyme
Location: 10046 - 11467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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