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Cluster: Rep_2796_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2796_c_0 Rep_2796_c_0_764 869765 871270 + GH77
CAZyme Rep_2796_c_0 Rep_2796_c_0_765 871400 873667 + GT35
TC Rep_2796_c_0 Rep_2796_c_0_766 874202 875401 - 3.A.1.1.22
TC Rep_2796_c_0 Rep_2796_c_0_767 875469 876308 - 3.A.1.1.45
TC Rep_2796_c_0 Rep_2796_c_0_768 876308 877162 - 3.A.1.1.45
TC Rep_2796_c_0 Rep_2796_c_0_769 877252 878568 - 3.A.1.1.45
TF Rep_2796_c_0 Rep_2796_c_0_770 878875 879594 - GntR
TC Rep_2796_c_0 Rep_2796_c_0_771 879822 882275 + 4.A.1.1.8
Gene ID: Rep_2796_c_0_764
Type: CAZyme
Location: 869765 - 871270 (+)
Gene ID: Rep_2796_c_0_765
Type: CAZyme
Location: 871400 - 873667 (+)
Gene ID: Rep_2796_c_0_766
Type: TC
Location: 874202 - 875401 (-)
Gene ID: Rep_2796_c_0_767
Type: TC
Location: 875469 - 876308 (-)
Gene ID: Rep_2796_c_0_768
Type: TC
Location: 876308 - 877162 (-)
Gene ID: Rep_2796_c_0_769
Type: TC
Location: 877252 - 878568 (-)
Gene ID: Rep_2796_c_0_770
Type: TF
Location: 878875 - 879594 (-)
Gene ID: Rep_2796_c_0_771
Type: TC
Location: 879822 - 882275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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