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Cluster: Rep_2796_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2796_c_0 Rep_2796_c_0_633 722827 723165 - 4.A.3.1.2
TF Rep_2796_c_0 Rep_2796_c_0_634 723380 724384 - LacI
TC Rep_2796_c_0 Rep_2796_c_0_635 724742 726517 + 4.A.3.1.1
CAZyme Rep_2796_c_0 Rep_2796_c_0_636 726584 728023 + GH1
TF Rep_2796_c_0 Rep_2796_c_0_637 728291 729328 - LacI
CAZyme Rep_2796_c_0 Rep_2796_c_0_638 729670 731112 + GH1
TC Rep_2796_c_0 Rep_2796_c_0_639 731289 733049 + 4.A.3.1.1
TF Rep_2796_c_0 Rep_2796_c_0_640 733462 734472 - LacI
TC Rep_2796_c_0 Rep_2796_c_0_641 734749 736527 + 4.A.3.1.1
CAZyme Rep_2796_c_0 Rep_2796_c_0_642 736603 738024 + GH1
pfam Rep_2796_c_0 Rep_2796_c_0_643 738390 739622 + Fic
STP Rep_2796_c_0 Rep_2796_c_0_644 739619 739999 - DeoRC
TC Rep_2796_c_0 Rep_2796_c_0_645 740162 741856 - 4.A.3.1.1
Gene ID: Rep_2796_c_0_633
Type: TC
Location: 722827 - 723165 (-)
Gene ID: Rep_2796_c_0_634
Type: TF
Location: 723380 - 724384 (-)
Gene ID: Rep_2796_c_0_635
Type: TC
Location: 724742 - 726517 (+)
Gene ID: Rep_2796_c_0_636
Type: CAZyme
Location: 726584 - 728023 (+)
Gene ID: Rep_2796_c_0_637
Type: TF
Location: 728291 - 729328 (-)
Gene ID: Rep_2796_c_0_638
Type: CAZyme
Location: 729670 - 731112 (+)
Gene ID: Rep_2796_c_0_639
Type: TC
Location: 731289 - 733049 (+)
Gene ID: Rep_2796_c_0_640
Type: TF
Location: 733462 - 734472 (-)
Gene ID: Rep_2796_c_0_641
Type: TC
Location: 734749 - 736527 (+)
Gene ID: Rep_2796_c_0_642
Type: CAZyme
Location: 736603 - 738024 (+)
Gene ID: Rep_2796_c_0_643
Type: pfam
Location: 738390 - 739622 (+)
Gene ID: Rep_2796_c_0_644
Type: STP
Location: 739619 - 739999 (-)
Gene ID: Rep_2796_c_0_645
Type: TC
Location: 740162 - 741856 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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