dbCAN Logo

Cluster: Rep_2796_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2796_c_4 Rep_2796_c_4_6 6783 7613 - 3.A.1.132.3
pfam Rep_2796_c_4 Rep_2796_c_4_7 7873 10752 + UvrA_DNA-bind | UvrA_inter
pfam Rep_2796_c_4 Rep_2796_c_4_8 10886 11386 + tRNA_edit
TC Rep_2796_c_4 Rep_2796_c_4_9 11390 13693 + 2.A.66.4.4
pfam Rep_2796_c_4 Rep_2796_c_4_10 13700 15640 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC Rep_2796_c_4 Rep_2796_c_4_11 16004 17614 + 3.A.1.5.27
TC Rep_2796_c_4 Rep_2796_c_4_12 17772 18728 + 3.A.1.5.38
TC Rep_2796_c_4 Rep_2796_c_4_13 18732 20747 + 3.A.1.5.25
TC Rep_2796_c_4 Rep_2796_c_4_14 20748 21575 + 3.A.1.5.27
CAZyme Rep_2796_c_4 Rep_2796_c_4_15 21707 22633 + CE7
Gene ID: Rep_2796_c_4_6
Type: TC
Location: 6783 - 7613 (-)
Gene ID: Rep_2796_c_4_7
Type: pfam
Location: 7873 - 10752 (+)
Gene ID: Rep_2796_c_4_8
Type: pfam
Location: 10886 - 11386 (+)
Gene ID: Rep_2796_c_4_9
Type: TC
Location: 11390 - 13693 (+)
Gene ID: Rep_2796_c_4_10
Type: pfam
Location: 13700 - 15640 (+)
Gene ID: Rep_2796_c_4_11
Type: TC
Location: 16004 - 17614 (+)
Gene ID: Rep_2796_c_4_12
Type: TC
Location: 17772 - 18728 (+)
Gene ID: Rep_2796_c_4_13
Type: TC
Location: 18732 - 20747 (+)
Gene ID: Rep_2796_c_4_14
Type: TC
Location: 20748 - 21575 (+)
Gene ID: Rep_2796_c_4_15
Type: CAZyme
Location: 21707 - 22633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List