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Cluster: Rep_2795_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2795_c_3 Rep_2795_c_3_24 25915 27084 - CE9
STP Rep_2795_c_3 Rep_2795_c_3_25 27202 28368 - SIS | SIS
TF Rep_2795_c_3 Rep_2795_c_3_26 28483 29214 - GntR
TC Rep_2795_c_3 Rep_2795_c_3_27 29400 30482 - 4.A.6.1.4
TC Rep_2795_c_3 Rep_2795_c_3_28 30472 31272 - 4.A.6.1.4
TC Rep_2795_c_3 Rep_2795_c_3_29 31363 31845 - 4.A.6.1.4
pfam Rep_2795_c_3 Rep_2795_c_3_30 31882 32163 - YajC
TC Rep_2795_c_3 Rep_2795_c_3_31 32163 32606 - 4.A.6.1.16
Gene ID: Rep_2795_c_3_24
Type: CAZyme
Location: 25915 - 27084 (-)
Gene ID: Rep_2795_c_3_25
Type: STP
Location: 27202 - 28368 (-)
Gene ID: Rep_2795_c_3_26
Type: TF
Location: 28483 - 29214 (-)
Gene ID: Rep_2795_c_3_27
Type: TC
Location: 29400 - 30482 (-)
Gene ID: Rep_2795_c_3_28
Type: TC
Location: 30472 - 31272 (-)
Gene ID: Rep_2795_c_3_29
Type: TC
Location: 31363 - 31845 (-)
Gene ID: Rep_2795_c_3_30
Type: pfam
Location: 31882 - 32163 (-)
Gene ID: Rep_2795_c_3_31
Type: TC
Location: 32163 - 32606 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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