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Cluster: Rep_2795_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2795_c_3 Rep_2795_c_3_5 4135 4473 - 4.A.3.1.2
TF Rep_2795_c_3 Rep_2795_c_3_6 4688 5692 - LacI
TC Rep_2795_c_3 Rep_2795_c_3_7 6050 7825 + 4.A.3.1.1
CAZyme Rep_2795_c_3 Rep_2795_c_3_8 7892 9331 + GH1
TF Rep_2795_c_3 Rep_2795_c_3_9 9675 10685 - LacI
TC Rep_2795_c_3 Rep_2795_c_3_10 10961 12739 + 4.A.3.1.1
CAZyme Rep_2795_c_3 Rep_2795_c_3_11 12816 14237 + GH1
Gene ID: Rep_2795_c_3_5
Type: TC
Location: 4135 - 4473 (-)
Gene ID: Rep_2795_c_3_6
Type: TF
Location: 4688 - 5692 (-)
Gene ID: Rep_2795_c_3_7
Type: TC
Location: 6050 - 7825 (+)
Gene ID: Rep_2795_c_3_8
Type: CAZyme
Location: 7892 - 9331 (+)
Gene ID: Rep_2795_c_3_9
Type: TF
Location: 9675 - 10685 (-)
Gene ID: Rep_2795_c_3_10
Type: TC
Location: 10961 - 12739 (+)
Gene ID: Rep_2795_c_3_11
Type: CAZyme
Location: 12816 - 14237 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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