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Cluster: Rep_2795_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2795_c_33 Rep_2795_c_33_4 4293 6746 - 4.A.1.1.8
TF Rep_2795_c_33 Rep_2795_c_33_5 6974 7693 + GntR
TC Rep_2795_c_33 Rep_2795_c_33_6 8000 9316 + 3.A.1.1.45
TC Rep_2795_c_33 Rep_2795_c_33_7 9404 10258 + 3.A.1.1.45
TC Rep_2795_c_33 Rep_2795_c_33_8 10258 11097 + 3.A.1.1.45
TC Rep_2795_c_33 Rep_2795_c_33_9 11166 12365 + 3.A.1.1.22
CAZyme Rep_2795_c_33 Rep_2795_c_33_10 12740 15007 - GT35
CAZyme Rep_2795_c_33 Rep_2795_c_33_11 15137 16642 - GH77
Gene ID: Rep_2795_c_33_4
Type: TC
Location: 4293 - 6746 (-)
Gene ID: Rep_2795_c_33_5
Type: TF
Location: 6974 - 7693 (+)
Gene ID: Rep_2795_c_33_6
Type: TC
Location: 8000 - 9316 (+)
Gene ID: Rep_2795_c_33_7
Type: TC
Location: 9404 - 10258 (+)
Gene ID: Rep_2795_c_33_8
Type: TC
Location: 10258 - 11097 (+)
Gene ID: Rep_2795_c_33_9
Type: TC
Location: 11166 - 12365 (+)
Gene ID: Rep_2795_c_33_10
Type: CAZyme
Location: 12740 - 15007 (-)
Gene ID: Rep_2795_c_33_11
Type: CAZyme
Location: 15137 - 16642 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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