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Cluster: Rep_2795_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2795_c_3 Rep_2795_c_3_54 55906 57264 - 2.A.33.1.1
pfam Rep_2795_c_3 Rep_2795_c_3_55 57531 58454 - DHH | DHHA2
STP Rep_2795_c_3 Rep_2795_c_3_56 58621 59574 - Glucokinase
TC Rep_2795_c_3 Rep_2795_c_3_57 59816 60148 - 4.A.3.2.3
TC Rep_2795_c_3 Rep_2795_c_3_58 60158 60460 - 4.A.3.2.9
TC Rep_2795_c_3 Rep_2795_c_3_59 60622 61965 - 4.A.3.2.9
CAZyme Rep_2795_c_3 Rep_2795_c_3_60 62085 63485 - GH1
Gene ID: Rep_2795_c_3_54
Type: TC
Location: 55906 - 57264 (-)
Gene ID: Rep_2795_c_3_55
Type: pfam
Location: 57531 - 58454 (-)
Gene ID: Rep_2795_c_3_56
Type: STP
Location: 58621 - 59574 (-)
Gene ID: Rep_2795_c_3_57
Type: TC
Location: 59816 - 60148 (-)
Gene ID: Rep_2795_c_3_58
Type: TC
Location: 60158 - 60460 (-)
Gene ID: Rep_2795_c_3_59
Type: TC
Location: 60622 - 61965 (-)
Gene ID: Rep_2795_c_3_60
Type: CAZyme
Location: 62085 - 63485 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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