Cluster: Rep_2795_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2795
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2795_c_0 | Rep_2795_c_0_3 | 2593 | 3708 | - | GT28 |
| TC | Rep_2795_c_0 | Rep_2795_c_0_4 | 3698 | 5191 | - | 2.A.103.1.1 |
| pfam | Rep_2795_c_0 | Rep_2795_c_0_5 | 5228 | 6634 | - | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_2795_c_0 | Rep_2795_c_0_6 | 6644 | 7663 | - | 9.B.146.1.6 |
Gene ID: Rep_2795_c_0_3
Type: CAZyme
Location: 2593 - 3708 (-)
Type: CAZyme
Location: 2593 - 3708 (-)
Gene ID: Rep_2795_c_0_4
Type: TC
Location: 3698 - 5191 (-)
Type: TC
Location: 3698 - 5191 (-)
Gene ID: Rep_2795_c_0_5
Type: pfam
Location: 5228 - 6634 (-)
Type: pfam
Location: 5228 - 6634 (-)
Gene ID: Rep_2795_c_0_6
Type: TC
Location: 6644 - 7663 (-)
Type: TC
Location: 6644 - 7663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900549275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.