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Cluster: Rep_2793_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2793_c_31 Rep_2793_c_31_11 8710 10215 + GH77
CAZyme Rep_2793_c_31 Rep_2793_c_31_12 10350 12617 + GT35
TC Rep_2793_c_31 Rep_2793_c_31_13 13073 14272 - 3.A.1.1.22
TC Rep_2793_c_31 Rep_2793_c_31_14 14341 15180 - 3.A.1.1.45
TC Rep_2793_c_31 Rep_2793_c_31_15 15180 16034 - 3.A.1.1.45
TC Rep_2793_c_31 Rep_2793_c_31_16 16122 17438 - 3.A.1.1.45
TF Rep_2793_c_31 Rep_2793_c_31_17 17745 18464 - GntR
TC Rep_2793_c_31 Rep_2793_c_31_18 18692 21142 + 4.A.1.1.8
Gene ID: Rep_2793_c_31_11
Type: CAZyme
Location: 8710 - 10215 (+)
Gene ID: Rep_2793_c_31_12
Type: CAZyme
Location: 10350 - 12617 (+)
Gene ID: Rep_2793_c_31_13
Type: TC
Location: 13073 - 14272 (-)
Gene ID: Rep_2793_c_31_14
Type: TC
Location: 14341 - 15180 (-)
Gene ID: Rep_2793_c_31_15
Type: TC
Location: 15180 - 16034 (-)
Gene ID: Rep_2793_c_31_16
Type: TC
Location: 16122 - 17438 (-)
Gene ID: Rep_2793_c_31_17
Type: TF
Location: 17745 - 18464 (-)
Gene ID: Rep_2793_c_31_18
Type: TC
Location: 18692 - 21142 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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