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Cluster: Rep_2793_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2793_c_27 Rep_2793_c_27_9 13536 14912 - GH13_20
TC Rep_2793_c_27 Rep_2793_c_27_10 15067 16263 - 2.A.1.2.18
TC Rep_2793_c_27 Rep_2793_c_27_11 16385 18745 - 9.A.8.1.6
peptidase Rep_2793_c_27 Rep_2793_c_27_12 18930 19832 - S09.UPW
TC Rep_2793_c_27 Rep_2793_c_27_13 20077 20640 + 4.A.1.2.6
pfam Rep_2793_c_27 Rep_2793_c_27_14 20822 22225 + tRNA-synt_2 | tRNA_anti-codon
pfam Rep_2793_c_27 Rep_2793_c_27_15 22484 23266 + WYL
TC Rep_2793_c_27 Rep_2793_c_27_16 23428 24408 + 3.A.1.34.1
TC Rep_2793_c_27 Rep_2793_c_27_17 24613 25536 + 3.A.1.34.1
TC Rep_2793_c_27 Rep_2793_c_27_18 25529 26323 + 3.A.1.34.1
Gene ID: Rep_2793_c_27_9
Type: CAZyme
Location: 13536 - 14912 (-)
Gene ID: Rep_2793_c_27_10
Type: TC
Location: 15067 - 16263 (-)
Gene ID: Rep_2793_c_27_11
Type: TC
Location: 16385 - 18745 (-)
Gene ID: Rep_2793_c_27_12
Type: peptidase
Location: 18930 - 19832 (-)
Gene ID: Rep_2793_c_27_13
Type: TC
Location: 20077 - 20640 (+)
Gene ID: Rep_2793_c_27_14
Type: pfam
Location: 20822 - 22225 (+)
Gene ID: Rep_2793_c_27_15
Type: pfam
Location: 22484 - 23266 (+)
Gene ID: Rep_2793_c_27_16
Type: TC
Location: 23428 - 24408 (+)
Gene ID: Rep_2793_c_27_17
Type: TC
Location: 24613 - 25536 (+)
Gene ID: Rep_2793_c_27_18
Type: TC
Location: 25529 - 26323 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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