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Cluster: Rep_2793_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2793_c_1 Rep_2793_c_1_19 27664 28425 + 9.B.18.1.2
CAZyme Rep_2793_c_1 Rep_2793_c_1_20 28426 29547 + GT4
CAZyme Rep_2793_c_1 Rep_2793_c_1_21 29544 30659 + GT4
NULL(UNKNOWN) Rep_2793_c_1 Rep_2793_c_1_22 30789 30977 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2793_c_1 Rep_2793_c_1_23 31088 32086 + GT2
NULL(UNKNOWN) Rep_2793_c_1 Rep_2793_c_1_24 32070 33305 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2793_c_1 Rep_2793_c_1_25 33305 34351 + GT2
Gene ID: Rep_2793_c_1_19
Type: TC
Location: 27664 - 28425 (+)
Gene ID: Rep_2793_c_1_20
Type: CAZyme
Location: 28426 - 29547 (+)
Gene ID: Rep_2793_c_1_21
Type: CAZyme
Location: 29544 - 30659 (+)
Gene ID: Rep_2793_c_1_22
Type:
Location: 30789 - 30977 (+)
Gene ID: Rep_2793_c_1_23
Type: CAZyme
Location: 31088 - 32086 (+)
Gene ID: Rep_2793_c_1_24
Type:
Location: 32070 - 33305 (+)
Gene ID: Rep_2793_c_1_25
Type: CAZyme
Location: 33305 - 34351 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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