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Cluster: Rep_2792_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2792_c_14 Rep_2792_c_14_20 22271 23596 + GH4
TC Rep_2792_c_14 Rep_2792_c_14_21 23679 25241 + 4.A.1.1.3
TF Rep_2792_c_14 Rep_2792_c_14_22 25434 26234 - HTH_6
TC Rep_2792_c_14 Rep_2792_c_14_23 26313 27893 - 4.A.1.1.14
CAZyme Rep_2792_c_14 Rep_2792_c_14_24 27918 29243 - GH4
TC Rep_2792_c_14 Rep_2792_c_14_25 29487 30716 - 2.A.1.2.25
Gene ID: Rep_2792_c_14_20
Type: CAZyme
Location: 22271 - 23596 (+)
Gene ID: Rep_2792_c_14_21
Type: TC
Location: 23679 - 25241 (+)
Gene ID: Rep_2792_c_14_22
Type: TF
Location: 25434 - 26234 (-)
Gene ID: Rep_2792_c_14_23
Type: TC
Location: 26313 - 27893 (-)
Gene ID: Rep_2792_c_14_24
Type: CAZyme
Location: 27918 - 29243 (-)
Gene ID: Rep_2792_c_14_25
Type: TC
Location: 29487 - 30716 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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