dbCAN HGM

Cluster: Rep_2792_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2792_c_4	Rep_2792_c_4_33	34241	35458	-	GT4
pfam	Rep_2792_c_4	Rep_2792_c_4_34	35473	36237	-	BcrAD_BadFG
pfam	Rep_2792_c_4	Rep_2792_c_4_35	36393	37556	-	HGD-D
TC	Rep_2792_c_4	Rep_2792_c_4_36	37633	38418	-	3.A.1.5.36
TC	Rep_2792_c_4	Rep_2792_c_4_37	38408	39403	-	3.A.1.5.37
TC	Rep_2792_c_4	Rep_2792_c_4_38	39407	40237	-	3.A.1.5.39
TC	Rep_2792_c_4	Rep_2792_c_4_39	40234	41187	-	3.A.1.5.39
TC	Rep_2792_c_4	Rep_2792_c_4_40	41276	42886	-	3.A.1.5.11
pfam	Rep_2792_c_4	Rep_2792_c_4_41	43071	44354	-	HGD-D
TC	Rep_2792_c_4	Rep_2792_c_4_42	44785	45855	-	3.A.1.10.2
TC	Rep_2792_c_4	Rep_2792_c_4_43	45859	47301	-	3.A.1.8.1

Gene ID: Rep_2792_c_4_33
Type: CAZyme
Location: 34241 - 35458 (-)

Gene ID: Rep_2792_c_4_34
Type: pfam
Location: 35473 - 36237 (-)

Gene ID: Rep_2792_c_4_35
Type: pfam
Location: 36393 - 37556 (-)

Gene ID: Rep_2792_c_4_36
Type: TC
Location: 37633 - 38418 (-)

Gene ID: Rep_2792_c_4_37
Type: TC
Location: 38408 - 39403 (-)

Gene ID: Rep_2792_c_4_38
Type: TC
Location: 39407 - 40237 (-)

Gene ID: Rep_2792_c_4_39
Type: TC
Location: 40234 - 41187 (-)

Gene ID: Rep_2792_c_4_40
Type: TC
Location: 41276 - 42886 (-)

Gene ID: Rep_2792_c_4_41
Type: pfam
Location: 43071 - 44354 (-)

Gene ID: Rep_2792_c_4_42
Type: TC
Location: 44785 - 45855 (-)

Gene ID: Rep_2792_c_4_43
Type: TC
Location: 45859 - 47301 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2792_c_4_33	vegan > omnivore	1.78404	0.01301
Rep_2792_c_4_36	vegan > omnivore	3.08404	0.01463
Rep_2792_c_4_37	vegan > omnivore	1.15228	0.01463
Rep_2792_c_4_38	vegan > omnivore	3.37374	0.01463
Rep_2792_c_4_39	vegan > omnivore	3.12912	0.01301
Rep_2792_c_4_40	vegan > omnivore	3.60540	0.01463