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Cluster: Rep_2792_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2792_c_0 Rep_2792_c_0_126 141113 142039 - CE7
TC Rep_2792_c_0 Rep_2792_c_0_127 142171 142998 - 3.A.1.5.27
TC Rep_2792_c_0 Rep_2792_c_0_128 142999 145014 - 3.A.1.5.25
TC Rep_2792_c_0 Rep_2792_c_0_129 145018 145974 - 3.A.1.5.38
TC Rep_2792_c_0 Rep_2792_c_0_130 146130 147743 - 3.A.1.5.27
pfam Rep_2792_c_0 Rep_2792_c_0_131 148108 150048 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC Rep_2792_c_0 Rep_2792_c_0_132 150055 152355 - 2.A.66.4.4
Gene ID: Rep_2792_c_0_126
Type: CAZyme
Location: 141113 - 142039 (-)
Gene ID: Rep_2792_c_0_127
Type: TC
Location: 142171 - 142998 (-)
Gene ID: Rep_2792_c_0_128
Type: TC
Location: 142999 - 145014 (-)
Gene ID: Rep_2792_c_0_129
Type: TC
Location: 145018 - 145974 (-)
Gene ID: Rep_2792_c_0_130
Type: TC
Location: 146130 - 147743 (-)
Gene ID: Rep_2792_c_0_131
Type: pfam
Location: 148108 - 150048 (-)
Gene ID: Rep_2792_c_0_132
Type: TC
Location: 150055 - 152355 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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