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Cluster: Rep_2792_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2792_c_27 Rep_2792_c_27_6 9587 12037 - 4.A.1.1.8
TF Rep_2792_c_27 Rep_2792_c_27_7 12266 12985 + GntR
TC Rep_2792_c_27 Rep_2792_c_27_8 13292 14608 + 3.A.1.1.45
TC Rep_2792_c_27 Rep_2792_c_27_9 14696 15550 + 3.A.1.1.45
TC Rep_2792_c_27 Rep_2792_c_27_10 15550 16389 + 3.A.1.1.45
TC Rep_2792_c_27 Rep_2792_c_27_11 16458 17657 + 3.A.1.1.22
CAZyme Rep_2792_c_27 Rep_2792_c_27_12 18192 20459 - GT35
CAZyme Rep_2792_c_27 Rep_2792_c_27_13 20588 22093 - GH77
Gene ID: Rep_2792_c_27_6
Type: TC
Location: 9587 - 12037 (-)
Gene ID: Rep_2792_c_27_7
Type: TF
Location: 12266 - 12985 (+)
Gene ID: Rep_2792_c_27_8
Type: TC
Location: 13292 - 14608 (+)
Gene ID: Rep_2792_c_27_9
Type: TC
Location: 14696 - 15550 (+)
Gene ID: Rep_2792_c_27_10
Type: TC
Location: 15550 - 16389 (+)
Gene ID: Rep_2792_c_27_11
Type: TC
Location: 16458 - 17657 (+)
Gene ID: Rep_2792_c_27_12
Type: CAZyme
Location: 18192 - 20459 (-)
Gene ID: Rep_2792_c_27_13
Type: CAZyme
Location: 20588 - 22093 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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