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Cluster: Rep_2786_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2786_c_4 Rep_2786_c_4_21 23808 25151 - 2.A.33.1.2
pfam Rep_2786_c_4 Rep_2786_c_4_22 25296 26222 - DHH | DHHA2
TC Rep_2786_c_4 Rep_2786_c_4_23 26473 27462 - 3.A.1.5.20
TC Rep_2786_c_4 Rep_2786_c_4_24 27462 28457 - 3.A.1.5.20
TC Rep_2786_c_4 Rep_2786_c_4_25 28468 29367 - 3.A.1.5.11
TC Rep_2786_c_4 Rep_2786_c_4_26 29377 30297 - 3.A.1.5.11
TC Rep_2786_c_4 Rep_2786_c_4_27 30419 32128 - 3.A.1.5.11
CAZyme Rep_2786_c_4 Rep_2786_c_4_28 32402 33751 + GH29
Gene ID: Rep_2786_c_4_21
Type: TC
Location: 23808 - 25151 (-)
Gene ID: Rep_2786_c_4_22
Type: pfam
Location: 25296 - 26222 (-)
Gene ID: Rep_2786_c_4_23
Type: TC
Location: 26473 - 27462 (-)
Gene ID: Rep_2786_c_4_24
Type: TC
Location: 27462 - 28457 (-)
Gene ID: Rep_2786_c_4_25
Type: TC
Location: 28468 - 29367 (-)
Gene ID: Rep_2786_c_4_26
Type: TC
Location: 29377 - 30297 (-)
Gene ID: Rep_2786_c_4_27
Type: TC
Location: 30419 - 32128 (-)
Gene ID: Rep_2786_c_4_28
Type: CAZyme
Location: 32402 - 33751 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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