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Cluster: Rep_2775_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2775_c_4 Rep_2775_c_4_95 116568 117419 - 3.A.1.24.5
TC Rep_2775_c_4 Rep_2775_c_4_96 117472 118155 - 3.A.1.24.5
TC Rep_2775_c_4 Rep_2775_c_4_97 118148 118897 - 3.A.1.24.1
pfam Rep_2775_c_4 Rep_2775_c_4_98 119343 119954 - TM7S3_TM198
NULL(UNKNOWN) Rep_2775_c_4 Rep_2775_c_4_99 119980 120456 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2775_c_4 Rep_2775_c_4_100 120555 121232 + 1.C.113.1.1
peptidase Rep_2775_c_4 Rep_2775_c_4_101 121362 122780 + M20.UPA
CAZyme Rep_2775_c_4 Rep_2775_c_4_102 122898 124421 - GH13_5
Gene ID: Rep_2775_c_4_95
Type: TC
Location: 116568 - 117419 (-)
Gene ID: Rep_2775_c_4_96
Type: TC
Location: 117472 - 118155 (-)
Gene ID: Rep_2775_c_4_97
Type: TC
Location: 118148 - 118897 (-)
Gene ID: Rep_2775_c_4_98
Type: pfam
Location: 119343 - 119954 (-)
Gene ID: Rep_2775_c_4_99
Type:
Location: 119980 - 120456 (-)
Gene ID: Rep_2775_c_4_100
Type: TC
Location: 120555 - 121232 (+)
Gene ID: Rep_2775_c_4_101
Type: peptidase
Location: 121362 - 122780 (+)
Gene ID: Rep_2775_c_4_102
Type: CAZyme
Location: 122898 - 124421 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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