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Cluster: Rep_2775_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2775_c_4 Rep_2775_c_4_57 70024 71562 + GH77
CAZyme Rep_2775_c_4 Rep_2775_c_4_58 71564 73828 + GT35
CAZyme Rep_2775_c_4 Rep_2775_c_4_59 73884 75569 + GH13_30
CAZyme Rep_2775_c_4 Rep_2775_c_4_60 75682 76668 + GH179
CAZyme Rep_2775_c_4 Rep_2775_c_4_61 76941 79130 - GH36
TC Rep_2775_c_4 Rep_2775_c_4_62 79267 80124 - 3.A.1.1.28
TC Rep_2775_c_4 Rep_2775_c_4_63 80124 80993 - 3.A.1.1.28
TC Rep_2775_c_4 Rep_2775_c_4_64 81009 82298 - 3.A.1.1.28
TC Rep_2775_c_4 Rep_2775_c_4_65 82317 83432 - 3.A.1.1.26
TF Rep_2775_c_4 Rep_2775_c_4_66 83846 84700 + HTH_AraC | HTH_AraC
pfam Rep_2775_c_4 Rep_2775_c_4_67 84707 86869 - BRCT | DNA_ligase_aden | DNA_ligase_ZBD | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5 | Nlig-Ia
TC Rep_2775_c_4 Rep_2775_c_4_68 87230 88468 - 2.A.1.2.97
TC Rep_2775_c_4 Rep_2775_c_4_69 88476 91046 - 3.A.3.5.15
Gene ID: Rep_2775_c_4_57
Type: CAZyme
Location: 70024 - 71562 (+)
Gene ID: Rep_2775_c_4_58
Type: CAZyme
Location: 71564 - 73828 (+)
Gene ID: Rep_2775_c_4_59
Type: CAZyme
Location: 73884 - 75569 (+)
Gene ID: Rep_2775_c_4_60
Type: CAZyme
Location: 75682 - 76668 (+)
Gene ID: Rep_2775_c_4_61
Type: CAZyme
Location: 76941 - 79130 (-)
Gene ID: Rep_2775_c_4_62
Type: TC
Location: 79267 - 80124 (-)
Gene ID: Rep_2775_c_4_63
Type: TC
Location: 80124 - 80993 (-)
Gene ID: Rep_2775_c_4_64
Type: TC
Location: 81009 - 82298 (-)
Gene ID: Rep_2775_c_4_65
Type: TC
Location: 82317 - 83432 (-)
Gene ID: Rep_2775_c_4_66
Type: TF
Location: 83846 - 84700 (+)
Gene ID: Rep_2775_c_4_67
Type: pfam
Location: 84707 - 86869 (-)
Gene ID: Rep_2775_c_4_68
Type: TC
Location: 87230 - 88468 (-)
Gene ID: Rep_2775_c_4_69
Type: TC
Location: 88476 - 91046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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