Cluster: Rep_2775_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2775
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2775_c_16 | Rep_2775_c_16_3 | 3268 | 4077 | + | 3.A.1.26.7 |
| TC | Rep_2775_c_16 | Rep_2775_c_16_4 | 4068 | 4877 | + | 3.A.1.26.9 |
| TC | Rep_2775_c_16 | Rep_2775_c_16_5 | 4874 | 5596 | + | 3.A.1.28.2 |
| pfam | Rep_2775_c_16 | Rep_2775_c_16_6 | 5593 | 6129 | + | ECF-ribofla_trS | ECF_trnsprt |
| CAZyme | Rep_2775_c_16 | Rep_2775_c_16_7 | 6288 | 7523 | + | GH3 |
| TC | Rep_2775_c_16 | Rep_2775_c_16_8 | 7532 | 9442 | - | 3.A.3.6.10 |
Gene ID: Rep_2775_c_16_3
Type: TC
Location: 3268 - 4077 (+)
Type: TC
Location: 3268 - 4077 (+)
Gene ID: Rep_2775_c_16_4
Type: TC
Location: 4068 - 4877 (+)
Type: TC
Location: 4068 - 4877 (+)
Gene ID: Rep_2775_c_16_5
Type: TC
Location: 4874 - 5596 (+)
Type: TC
Location: 4874 - 5596 (+)
Gene ID: Rep_2775_c_16_6
Type: pfam
Location: 5593 - 6129 (+)
Type: pfam
Location: 5593 - 6129 (+)
Gene ID: Rep_2775_c_16_7
Type: CAZyme
Location: 6288 - 7523 (+)
Type: CAZyme
Location: 6288 - 7523 (+)
Gene ID: Rep_2775_c_16_8
Type: TC
Location: 7532 - 9442 (-)
Type: TC
Location: 7532 - 9442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Thermophilibacter
Species
Thermophilibacter sp002159735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.