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Cluster: Rep_2775_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2775_c_6 Rep_2775_c_6_14 16210 17553 + 3.A.1.1.45
TC Rep_2775_c_6 Rep_2775_c_6_15 17638 18480 + 3.A.1.1.45
TC Rep_2775_c_6 Rep_2775_c_6_16 18480 19325 + 3.A.1.1.45
TF Rep_2775_c_6 Rep_2775_c_6_17 19341 20396 + LacI
CAZyme Rep_2775_c_6 Rep_2775_c_6_18 20393 21892 + GH77
TC Rep_2775_c_6 Rep_2775_c_6_19 21906 23084 + 3.A.1.1.22
Gene ID: Rep_2775_c_6_14
Type: TC
Location: 16210 - 17553 (+)
Gene ID: Rep_2775_c_6_15
Type: TC
Location: 17638 - 18480 (+)
Gene ID: Rep_2775_c_6_16
Type: TC
Location: 18480 - 19325 (+)
Gene ID: Rep_2775_c_6_17
Type: TF
Location: 19341 - 20396 (+)
Gene ID: Rep_2775_c_6_18
Type: CAZyme
Location: 20393 - 21892 (+)
Gene ID: Rep_2775_c_6_19
Type: TC
Location: 21906 - 23084 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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