Cluster: Rep_2763_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2763
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2763_c_29 | Rep_2763_c_29_8 | 7107 | 8219 | - | GT28 |
| TC | Rep_2763_c_29 | Rep_2763_c_29_9 | 8216 | 9628 | - | 2.A.103.1.3 |
| pfam | Rep_2763_c_29 | Rep_2763_c_29_10 | 9621 | 11045 | - | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_2763_c_29 | Rep_2763_c_29_11 | 11058 | 12080 | - | 9.B.146.1.6 |
Gene ID: Rep_2763_c_29_8
Type: CAZyme
Location: 7107 - 8219 (-)
Type: CAZyme
Location: 7107 - 8219 (-)
Gene ID: Rep_2763_c_29_9
Type: TC
Location: 8216 - 9628 (-)
Type: TC
Location: 8216 - 9628 (-)
Gene ID: Rep_2763_c_29_10
Type: pfam
Location: 9621 - 11045 (-)
Type: pfam
Location: 9621 - 11045 (-)
Gene ID: Rep_2763_c_29_11
Type: TC
Location: 11058 - 12080 (-)
Type: TC
Location: 11058 - 12080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp902464015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2763_c_29_8 | vegetarian > omnivore | 4.22313 | 0.00565 |
| Rep_2763_c_29_8 | vegetarian > vegan | 3.38752 | 0.01332 |
| Rep_2763_c_29_10 | vegetarian > omnivore | 3.64162 | 0.00565 |
| Rep_2763_c_29_10 | vegetarian > vegan | 2.75507 | 0.01332 |