Cluster: Rep_2763_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2763
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2763_c_24 | Rep_2763_c_24_8 | 9579 | 10424 | + | 3.A.1.103.6 |
| TC | Rep_2763_c_24 | Rep_2763_c_24_9 | 10440 | 11216 | + | 3.A.1.103.1 |
| CAZyme | Rep_2763_c_24 | Rep_2763_c_24_10 | 11221 | 12405 | + | GT2 |
| CAZyme | Rep_2763_c_24 | Rep_2763_c_24_11 | 12411 | 13427 | + | GT2 |
Gene ID: Rep_2763_c_24_8
Type: TC
Location: 9579 - 10424 (+)
Type: TC
Location: 9579 - 10424 (+)
Gene ID: Rep_2763_c_24_9
Type: TC
Location: 10440 - 11216 (+)
Type: TC
Location: 10440 - 11216 (+)
Gene ID: Rep_2763_c_24_10
Type: CAZyme
Location: 11221 - 12405 (+)
Type: CAZyme
Location: 11221 - 12405 (+)
Gene ID: Rep_2763_c_24_11
Type: CAZyme
Location: 12411 - 13427 (+)
Type: CAZyme
Location: 12411 - 13427 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp902464015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2763_c_24_10 | vegetarian > omnivore | 4.67541 | 0.00565 |
| Rep_2763_c_24_10 | vegetarian > vegan | 5.28136 | 0.01332 |