Cluster: Rep_2763_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2763
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2763_c_18 | Rep_2763_c_18_24 | 26653 | 27423 | - | 3.A.1.3.10 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_25 | 27416 | 28054 | - | 3.A.1.3.12 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_26 | 28219 | 29364 | - | 3.A.1.3.2 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_27 | 29590 | 30687 | + | 3.A.1.3.27 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_28 | 30777 | 31511 | + | 3.A.1.3.15 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_29 | 31498 | 32220 | + | 3.A.1.3.25 |
| pfam | Rep_2763_c_18 | Rep_2763_c_18_30 | 32304 | 33299 | - | Patatin | DUF6363 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_31 | 33307 | 34566 | - | 2.A.1.24.4 |
| NULL(UNKNOWN) | Rep_2763_c_18 | Rep_2763_c_18_32 | 34760 | 35710 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2763_c_18 | Rep_2763_c_18_33 | 35882 | 36745 | - | 2.A.109.2.3 |
| TC | Rep_2763_c_18 | Rep_2763_c_18_34 | 36791 | 37339 | - | 2.A.107.1.2 |
| CAZyme | Rep_2763_c_18 | Rep_2763_c_18_35 | 37669 | 39471 | - | CE4 |
Gene ID: Rep_2763_c_18_24
Type: TC
Location: 26653 - 27423 (-)
Type: TC
Location: 26653 - 27423 (-)
Gene ID: Rep_2763_c_18_25
Type: TC
Location: 27416 - 28054 (-)
Type: TC
Location: 27416 - 28054 (-)
Gene ID: Rep_2763_c_18_26
Type: TC
Location: 28219 - 29364 (-)
Type: TC
Location: 28219 - 29364 (-)
Gene ID: Rep_2763_c_18_27
Type: TC
Location: 29590 - 30687 (+)
Type: TC
Location: 29590 - 30687 (+)
Gene ID: Rep_2763_c_18_28
Type: TC
Location: 30777 - 31511 (+)
Type: TC
Location: 30777 - 31511 (+)
Gene ID: Rep_2763_c_18_29
Type: TC
Location: 31498 - 32220 (+)
Type: TC
Location: 31498 - 32220 (+)
Gene ID: Rep_2763_c_18_30
Type: pfam
Location: 32304 - 33299 (-)
Type: pfam
Location: 32304 - 33299 (-)
Gene ID: Rep_2763_c_18_31
Type: TC
Location: 33307 - 34566 (-)
Type: TC
Location: 33307 - 34566 (-)
Gene ID: Rep_2763_c_18_32
Type:
Location: 34760 - 35710 (+)
Type:
Location: 34760 - 35710 (+)
Gene ID: Rep_2763_c_18_33
Type: TC
Location: 35882 - 36745 (-)
Type: TC
Location: 35882 - 36745 (-)
Gene ID: Rep_2763_c_18_34
Type: TC
Location: 36791 - 37339 (-)
Type: TC
Location: 36791 - 37339 (-)
Gene ID: Rep_2763_c_18_35
Type: CAZyme
Location: 37669 - 39471 (-)
Type: CAZyme
Location: 37669 - 39471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp902464015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2763_c_18_26 | vegetarian > vegan | 1.61996 | 0.01332 |
| Rep_2763_c_18_30 | vegan > omnivore | 13.79381 | 0.00000 |
| Rep_2763_c_18_30 | vegetarian > omnivore | 17.74352 | 0.00565 |
| Rep_2763_c_18_30 | vegetarian > vegan | 3.94971 | 0.01332 |
| Rep_2763_c_18_32 | vegetarian > omnivore | 3.71766 | 0.00565 |
| Rep_2763_c_18_32 | vegetarian > vegan | 18.12782 | 0.01332 |
| Rep_2763_c_18_34 | vegetarian > omnivore | 17.98319 | 0.00565 |
| Rep_2763_c_18_34 | vegetarian > vegan | 17.98319 | 0.01332 |