dbCAN HGM

Cluster: Rep_2763_CGC2

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2763_c_10	Rep_2763_c_10_45	52435	53280	+	3.A.1.26.7
TC	Rep_2763_c_10	Rep_2763_c_10_46	53283	54167	+	3.A.1.26.9
TC	Rep_2763_c_10	Rep_2763_c_10_47	54167	54967	+	3.A.1.25.4
pfam	Rep_2763_c_10	Rep_2763_c_10_48	55002	55475	+	Acetyltransf_1 \| FR47 \| Acetyltransf_6 \| Acetyltransf_7 \| Acetyltransf_9 \| Acetyltransf_10
CAZyme	Rep_2763_c_10	Rep_2763_c_10_49	56067	57209	-	GT8

Gene ID: Rep_2763_c_10_45
Type: TC
Location: 52435 - 53280 (+)

Gene ID: Rep_2763_c_10_46
Type: TC
Location: 53283 - 54167 (+)

Gene ID: Rep_2763_c_10_47
Type: TC
Location: 54167 - 54967 (+)

Gene ID: Rep_2763_c_10_48
Type: pfam
Location: 55002 - 55475 (+)

Gene ID: Rep_2763_c_10_49
Type: CAZyme
Location: 56067 - 57209 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2763_c_10_45	vegetarian > omnivore	1.38960	0.00565
Rep_2763_c_10_46	vegan > omnivore	2.45730	0.00000
Rep_2763_c_10_46	vegetarian > omnivore	4.29790	0.00565
Rep_2763_c_10_46	vegetarian > vegan	1.84060	0.01332
Rep_2763_c_10_47	vegan > omnivore	16.28810	0.00000
Rep_2763_c_10_47	vegetarian > omnivore	18.04553	0.00565
Rep_2763_c_10_47	vegetarian > vegan	1.75744	0.01332
Rep_2763_c_10_49	vegan > omnivore	13.59522	0.00000
Rep_2763_c_10_49	vegetarian > omnivore	18.06881	0.00565
Rep_2763_c_10_49	vegetarian > vegan	4.47359	0.01332