Cluster: Rep_275_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_275
- CGC Family ID: CGCFAM_02559
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_275_c_5 | Rep_275_c_5_26 | 35374 | 36522 | - | GH25 |
| CAZyme | Rep_275_c_5 | Rep_275_c_5_27 | 36519 | 37253 | - | GH25 |
| TF | Rep_275_c_5 | Rep_275_c_5_28 | 37465 | 38361 | - | HTH_AraC |
| NULL(UNKNOWN) | Rep_275_c_5 | Rep_275_c_5_29 | 38627 | 39103 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_275_c_5 | Rep_275_c_5_30 | 39118 | 40578 | - | 3.A.7.16.1 |
Gene ID: Rep_275_c_5_26
Type: CAZyme
Location: 35374 - 36522 (-)
Type: CAZyme
Location: 35374 - 36522 (-)
Gene ID: Rep_275_c_5_27
Type: CAZyme
Location: 36519 - 37253 (-)
Type: CAZyme
Location: 36519 - 37253 (-)
Gene ID: Rep_275_c_5_28
Type: TF
Location: 37465 - 38361 (-)
Type: TF
Location: 37465 - 38361 (-)
Gene ID: Rep_275_c_5_29
Type:
Location: 38627 - 39103 (+)
Type:
Location: 38627 - 39103 (+)
Gene ID: Rep_275_c_5_30
Type: TC
Location: 39118 - 40578 (-)
Type: TC
Location: 39118 - 40578 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
SFTJ01
Species
SFTJ01 sp905210415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.