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Cluster: Rep_275_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_275_c_58 Rep_275_c_58_6 6588 7232 - 3.A.1.9.2
NULL(UNKNOWN) Rep_275_c_58 Rep_275_c_58_7 7492 8298 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_275_c_58 Rep_275_c_58_8 8416 8535 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_275_c_58 Rep_275_c_58_9 8780 9931 - GH3
TC Rep_275_c_58 Rep_275_c_58_10 10309 10542 + 3.D.1.6.3
pfam Rep_275_c_58 Rep_275_c_58_11 10579 11841 + ketoacyl-synt | Ketoacyl-synt_C
pfam Rep_275_c_58 Rep_275_c_58_12 11859 12740 + dsrm | Ribonuclease_3 | Ribonucleas_3_3 | RM44_endonuclase
TC Rep_275_c_58 Rep_275_c_58_13 12922 14625 + 1.B.6.1.14
Gene ID: Rep_275_c_58_6
Type: TC
Location: 6588 - 7232 (-)
Gene ID: Rep_275_c_58_7
Type:
Location: 7492 - 8298 (-)
Gene ID: Rep_275_c_58_8
Type:
Location: 8416 - 8535 (-)
Gene ID: Rep_275_c_58_9
Type: CAZyme
Location: 8780 - 9931 (-)
Gene ID: Rep_275_c_58_10
Type: TC
Location: 10309 - 10542 (+)
Gene ID: Rep_275_c_58_11
Type: pfam
Location: 10579 - 11841 (+)
Gene ID: Rep_275_c_58_12
Type: pfam
Location: 11859 - 12740 (+)
Gene ID: Rep_275_c_58_13
Type: TC
Location: 12922 - 14625 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
SFTJ01
→
Species
SFTJ01 sp905210415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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