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Cluster: Rep_275_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_275_c_18 Rep_275_c_18_16 15397 16305 + 1.B.14.6.11
TC Rep_275_c_18 Rep_275_c_18_17 16262 18853 + 1.B.14.6.1
pfam Rep_275_c_18 Rep_275_c_18_18 18867 20654 + SusD_RagB | SusD-like_3
pfam Rep_275_c_18 Rep_275_c_18_19 20746 22245 + Laminin_G_2 | Exo_endo_phos | Laminin_G_3
CAZyme Rep_275_c_18 Rep_275_c_18_20 22251 23858 + GH20
pfam Rep_275_c_18 Rep_275_c_18_21 23899 24771 + Shr-like_HID
CAZyme Rep_275_c_18 Rep_275_c_18_22 24875 27502 + GH2
pfam Rep_275_c_18 Rep_275_c_18_23 27530 30733 + NAGPA | GH123_cat
CAZyme Rep_275_c_18 Rep_275_c_18_24 30753 33059 + CBM67 | GH78
Gene ID: Rep_275_c_18_16
Type: TC
Location: 15397 - 16305 (+)
Gene ID: Rep_275_c_18_17
Type: TC
Location: 16262 - 18853 (+)
Gene ID: Rep_275_c_18_18
Type: pfam
Location: 18867 - 20654 (+)
Gene ID: Rep_275_c_18_19
Type: pfam
Location: 20746 - 22245 (+)
Gene ID: Rep_275_c_18_20
Type: CAZyme
Location: 22251 - 23858 (+)
Gene ID: Rep_275_c_18_21
Type: pfam
Location: 23899 - 24771 (+)
Gene ID: Rep_275_c_18_22
Type: CAZyme
Location: 24875 - 27502 (+)
Gene ID: Rep_275_c_18_23
Type: pfam
Location: 27530 - 30733 (+)
Gene ID: Rep_275_c_18_24
Type: CAZyme
Location: 30753 - 33059 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
SFTJ01
→
Species
SFTJ01 sp905210415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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